Detection of SARS-CoV-2 N protein using AgNPs-modified aligned silicon nanowires BioSERS chip

Sadok Kouz (1, 2) , Amal Raouafi (2) , Awatef Ouhibi (2) , Nathalie Lorrain (1) , Makram Essafi (2, 3) , Manel Mejri (2, 3) , Noureddine Raouafi (2) , Adel Moadhen (2) , Mohamed Guendouz (1)

1 FOTON - Institut des Fonctions Optiques pour les Technologies de l'informatiON
2 UTM - Université de Tunis El Manar
3 Université de Tunis

The SARS-CoV-2 (COVID-19) pandemic had a strong impact on societies and economies worldwide and tests for high-performance detection of SARS-CoV-2 biomarkers are still needed for potential future outbreaks of the disease. In this paper, we present the different steps for the design of an aptamer-based surface-enhanced Raman scattering (BioSERS) sensing chip capable of detecting the coronavirus nucleocapsid protein (N protein) in spiked phosphate-buffered solutions and real samples of human blood serum. Optimization of the preparation steps in terms of the aptamer concentration used for the functionalization of the silver nanoparticles, time for affixing the aptamer, incubation time with target protein, and insulation of the silver active surface with cysteamine, led to a sensitive BioSERS chip, which was able to detect the N protein in the range from 1 to 75 ng mL-1 in spiked phosphate-buffered solutions with a detection limit of 1 ng mL-1 within 30 min. Furthermore, the BioSERS chip was used to detect the target protein in scarcely spiked human serum. This study demonstrates the possibility of a clinical application that can improve the detection limit and accuracy of the currently commercialized SARS-CoV-2 immunodiagnostic kit. Additionally, the system is modular and can be applied to detect other proteins by only changing the aptamer.

Domaines: Sciences de l'ingénieur [physics]

Sadok Kouz, Amal Raouafi, Awatef Ouhibi, Nathalie Lorrain, Makram Essafi, et al.. Detection of SARS-CoV-2 N protein using AgNPs-modified aligned silicon nanowires BioSERS chip. RSC Advances, 2024, 14 (17), pp.12071-12080. ⟨10.1039/d4ra00267a⟩. ⟨hal-04564518⟩